Program

MS-Based Proteomics Bioinformatics and Health Informatics – 13.05.2014

Time

Events

Details

18:00-20:00

Registration


MS-Based Proteomics, Bioinformatics, and Health Informatics – 14.05.2014

Time

Events

Details

08:00-09:00

Registration

09:00-09:30

Opening

Talat Yalçın and Knut Reinert

Knut Reinert, presiding

09:30-10:30

Key Note

Carolyn J. Cassady
“Sequencing of Acidic Peptides by Mass Spectrometry”

10:30-11:00

Coffee Break

11:00-12:30

Short Talks

Christian Fufezan
“Big Data Techniques in MS Data Analysis”

Hande Karaköse
“Proteomics of Stevia rebaudiana”

Can Yılmaz
Sample Preparation for Computational Proteomics”

12:30-14:00

Lunch

Bekir Salih, presiding

14:00-15:00

Key Note

Berhnard Y. Renard
“Metagenomic and Error-Tolerant Protein Identification for Diagnostic Applications”
15:00-15:30

Coffee Break

15:30-16:30

Workshop

Güneş Barka
SunChrome
16:30-18:00

Short Talks

Nazlı Arda
“Pollen Allergenomics”

Jens Allmer
“OMSSA has been Discontinued by NCBI; did its Performance Cause This Decision?”

Pedro Navarro
“Enhanced HDMSE the Use of Ion Mobility Drift Time Specific Profiles Data Independent Acquisition Protein Coverage Through”

MS-Based Proteomics, Bioinformatics, and Health Informatics – 15.05.2014

Time

Events

Details

Bernhard Y. Renard, presiding

09:00-10:00

Key Note

Bernd O. Keller
“The Role of Dietary Fatty Acids in Early Development”
10:00-10:30

Short Talk

Özge Can
“Tumor Biomarker Research in Neuroscience: Application to Brain Tumors”
10:30-11:00

Coffee Break

11:00-12:30

Workshop

Knut Reinert, Marc Rurik
OpenMS Hands on Tutorial
12:30-14:00

Lunch

Türkan Haliloğlu, presiding

14:00-15:00

Key Note

Bekir Salih
“Smart Sol-Gels for Phosphoproteomics and Glycoproteomics Applications by Mass Spectrometry”
15:00-15:30

Short Talk

Dörte Becher
“Systems Wide Proteome Analysis in Gram-Positive Bacteria”
15:30-16:00

Coffee Break

16:00-17:00

Key Note

Lars Malmström
“Towards Elucidating the Several Roles of Single Nucleotide Polymorphisms in Pathogenic Bacteria”
17:00-17:30

Short Talk

David Meierhofer
"ρ0 Cells, a Metabolome and Proteome Survey of Cells Lacking Mitochondrial DNA (mtDNA)”
18:00

Social Events

MS-Based Proteomics Bioinformatics and Health Informatics – 16.05.2014

Time

Events

Details

David Meierhofer, presiding

09:00-10:00

Key Note

Martin Eisenacher
“The Bioinformatics of Proteomics and Beyond”
10:00-10:30

Short Talk

Bernd O. Keller
“Chemical Interferences in Advanced Mass Spectrometry”
10:30-11:00

Coffee Break

11:00-12:00

Key Note

Türkan Haliloğlu
“Protein Dynamics and Binding”
12:00-12:30

Short Talk

René Zahedi
“Studying PTM Crosstalk Using Quantitative Mass Spectrometry”
12:30-13:00

Bilateral Project Support Option

13:00-14:00

Lunch